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path: root/cad/src/dna/model
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-rw-r--r--AtomChainOrRing.py1765logplain
-rw-r--r--ChainAtomMarker.py10959logplain
-rw-r--r--DnaChain.py40694logplain
-rw-r--r--DnaGroup.py15028logplain
-rw-r--r--DnaLadder.py76386logplain
-rw-r--r--DnaLadderRailChunk.py60490logplain
-rw-r--r--DnaLadder_pam_conversion.py60183logplain
-rw-r--r--DnaMarker.py42573logplain
-rw-r--r--DnaSegment.py35579logplain
-rw-r--r--DnaStrand.py52706logplain
-rw-r--r--DnaStrandOrSegment.py4198logplain
-rw-r--r--Dna_Constants.py12879logplain
-rw-r--r--PAM_atom_rules.py5367logplain
-rw-r--r--WholeChain.py43835logplain
-rw-r--r--__init__.py0logplain
-rw-r--r--dna_model_constants.py2205logplain
-rwxr-xr-xelements_data_PAM3.py5842logplain
-rwxr-xr-xelements_data_PAM5.py6573logplain
d---------outtakes178logplain
-rw-r--r--pam3plus5_math.py13114logplain
-rw-r--r--pam3plus5_ops.py22915logplain
-rw-r--r--pam_conversion_mmp.py17529logplain