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## Process this file with automake to produce Makefile.in
# Note: Makefile is automatically generated from Makefile.in by the configure
# script, and Makefile.in is generated from Makefile.am by automake.
AM_CPPFLAGS = -I$(top_srcdir)/include -DGMXLIBDIR=\"$(datadir)/top\"
LDADD = ../mdlib/libmd@LIBSUFFIX@.la ../gmxlib/libgmx@LIBSUFFIX@.la \
-lHDF5_SimResults -lhdf5 -lz
bin_PROGRAMS = \
grompp mdrun tpbconv pdb2gmx \
protonate luck gmxdump \
gmxcheck x2top ffscan
luck_SOURCES = luck.c cplusplus.cpp
gmxdump_SOURCES = gmxdump.c cplusplus.cpp
grompp_SOURCES = \
topio.c toppush.c topcat.c topshake.c \
convparm.c tomorse.c sorting.c splitter.c \
vsite_parm.c readir.c add_par.c topexcl.c \
toputil.c topdirs.c grompp.c add_par.h \
splitter.h topio.h toputil.h convparm.h \
sorting.h topdirs.h toppush.h vsite_parm.h \
readir.h topcat.h topexcl.h topshake.h \
compute_io.h compute_io.c cplusplus.cpp
tpbconv_SOURCES = \
readir.c toputil.c topdirs.c add_par.c \
topexcl.c tpbconv.c add_par.h toputil.h \
topdirs.h readir.h topexcl.h cplusplus.cpp
pdb2gmx_SOURCES = \
hizzie.c xlate.c specbond.c ter_db.c \
h_db.c genhydro.c pdb2top.c gen_ad.c \
gen_vsite.c pgutil.c resall.c hackblock.c \
add_par.c topexcl.c toputil.c topdirs.c \
pdb2gmx.c gen_ad.h add_par.h h_db.h \
pdb2top.h resall.h toputil.h xlate.h \
gen_vsite.h hackblock.h pgutil.h ter_db.h \
topdirs.h genhydro.h hizzie.h specbond.h \
topexcl.h cplusplus.cpp
#rtp2xml_SOURCES = \
# hizzie.c xlate.c specbond.c ter_db.c \
# h_db.c genhydro.c pdb2top.c gen_ad.c \
# gen_dum.c pgutil.c resall.c hackblock.c \
# add_par.c topexcl.c toputil.c topdirs.c \
# rtp2xml.c gen_ad.h add_par.h h_db.h \
# pdb2top.h resall.h toputil.h xlate.h \
# gen_dum.h hackblock.h pgutil.h ter_db.h \
# topdirs.h genhydro.h hizzie.h specbond.h \
# topexcl.h
protonate_SOURCES = \
hackblock.c ter_db.c h_db.c genhydro.c \
pgutil.c resall.c add_par.c topexcl.c \
toputil.c topdirs.c protonate.c add_par.h \
h_db.h resall.h toputil.h hackblock.h \
pgutil.h ter_db.h topdirs.h topexcl.h cplusplus.cpp
gmxcheck_SOURCES = \
gmxcheck.c tpbcmp.c tpbcmp.h cplusplus.cpp
x2top_SOURCES = \
toppush.c nm2type.c pdb2top.c gen_ad.c \
gen_vsite.c pgutil.c resall.c hackblock.c \
add_par.c topexcl.c toputil.c topdirs.c \
x2top.c add_par.h gen_ad.h pdb2top.h \
resall.h toputil.h gen_vsite.h hackblock.h \
pgutil.h topdirs.h toppush.h topexcl.h \
x2top.h cplusplus.cpp
mdrun_SOURCES = \
glaasje.c glaasje.h gctio.c init_sh.c \
ionize.c ionize.h xmdrun.h \
do_gct.c relax_sh.c repl_ex.c repl_ex.h \
xutils.c compute_io.h compute_io.c \
md.c mdrun.c genalg.c genalg.h cplusplus.cpp
ffscan_SOURCES = \
ffscan.c \
glaasje.c glaasje.h gctio.c init_sh.c \
ionize.c ionize.h md.c genalg.c \
do_gct.c relax_sh.c repl_ex.c repl_ex.h \
xutils.c compute_io.h compute_io.c cplusplus.cpp
# shortcut to install only mdrun
install-mdrun: mdrun$(EXEEXT)
$(mkinstalldirs) $(DESTDIR)$(bindir)
if test -f mdrun$(EXEEXT); then \
f=`echo mdrun$(EXEEXT)|sed 's/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(INSTALL_PROGRAM) mdrun$(EXEEXT) $(DESTDIR)$(bindir)/$$f"; \
$(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(INSTALL_PROGRAM) mdrun$(EXEEXT) $(DESTDIR)$(bindir)/$$f; \
else :; fi
CLEANFILES = *~ \\\#*
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