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Select one procedure:
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1:
pp...p
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Consecutive repeats of a given patterns
p (Ex. ATR TTY).
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2:
pp...p
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Strings larger than composed by repeated patterns of
length l (
< l < )
of characters from the alphabet : 0={A,C,T,G,N} 1={R,Y,N}.
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3:
pp...pqq...q
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Consecutive repeats of a given patterns p
(Ex. ATR TTY) and their
inverses q (Ex. YAT RAA).
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4:
pp...pqq...q
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Consecutive repeats of any pattern
p of a given length l and their inverses q.
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5:
.................
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The n most frequents patterns of length
l <15.
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6:
...(.p.p..p.)....
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Clusters of length L that contains at least n repeats of pattern p
(Ex. ATR).
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7:
...(.p.p..p.)....
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Clusters of length L that contains at least n repeats of any pattern of length l .
(Not active)
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Minimum number of consecutive repeats |
Only for
procedures 1,3,and 4.
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Scale factor of the graphical view
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Only for
procedures 1,2, 3,and 4.
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Select one entry file type:
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1:
Genbank identifier
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2:
.gbk file
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3:
Fasta (and .PTT files)
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Fasta file: PTT file:
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4:
File from our DB
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