########################################################################
### FILE:       instrument.mod
### PURPOSE:    Magnum instrument initialization
### SCOPE:	Top Level
###
### Copyrights (C) 2010 Life Technologies.  All rights reserved.
########################################################################

### Determine number of flowchips
    VAR NumFlowChips $(SYST:ENV? -default=1 NUMFLOWCHIPS)
    ALIas NumFlowChips? VARiable? NumFlowChips

### Set up logging
    MODule logging.mod

### State subsystem
    MODule states.mod

### Load imaging interface
    MODule imaging.mod

### Load SURVey command
    MODule survey.mod

### Add  shutdown module when power loss on Instrument Server
    MODule powerdown.mod    

### Load support for hardware
    MODule hardware.mod

### Methods for checking versions and upgrading firmware
    MODule firmwareupgrade.mod

### State subsystem
    MODule toggles.mod

### Set up Stage
    MODule stage.mod

### Set up Fluidics
    MODule fluidics.mod

### Load LLAC register definitons
    MODule llacregisters.mod

### Set up controls for each flow chip
    REPeat -counter=idx -start=1 ${NumFlowChips} <quote>
	BRANch+ -type=LLAC FlowChip${idx}

	DESCRIBE FlowChip${idx} <quote>
            Client level commands to operate flow chips and manage
            fluidics scripts. This includes control of the robotics
            system as well as thermal block.
        </quote>

        FlowChip${idx}:VARiable FC ${idx}
	FlowChip${idx}:MODule aliases.mod
        FlowChip${idx}:MODule flowchip.mod
    </quote>


### Load local overrides
    TRY <try.first>
        MODule local.mod
    </try.first> <try.second>
        WARNing "Cannot load local overrides: [${error}] ${message}"
    </try.second>

### Set up LLAC registration/event handlers
    MODule llacinit.mod