RNA pol, replication fidelity
Scott A Hoffman
schoffma at badlands.nodak.edu
Thu Nov 30 21:36:05 EST 1995
Question for anyone.
Recently, I've attended a few seminars on viral pathogenesis. An
interesting topic that seemed to crop up from time to time was that a few
RNA viruses (most notably Ebola and Dengue) show a high replication
fidelity. This is interesting since to my understanding RNA viruses tend
toward high rates of mutation, the idea is that the replicative machinery
is inefficient. The question of course is why? Why, should one virus
show high rates of mutation and others not. Is there any evidence that
the replicative machinery (RNA pol, etc.) of some viruses are more
efficient. Is there something inherent in the secondary structure of
some viruses that may lead to lowered mutation rates. To what degree
does natural selection play a role? I could envision a situtation in
which a number of progeny are made (the replicative machinery is just as
inefficient as other viruses) but the conditions are so stringent for
survival that only those sequences that show a few base pair changes can
still be viable. This however begs certain other questions. For
example, as I understand it, Dengue reaches high virus titers. As it
turns out, each virus is as viable as the next, and for good reason: The
mosquito vector requires high virus titers to become infected. No
vector infection - no transmission. It seems counterintuitive that
selective pressures play a huge role, if they did then one would expect
lower virus titers (unless of course, that virus replication continues
at very high speeds). Well, I feel as if I'm beginning to babble. So
I'll leave the question open. Does anyone have any ideas, thoughts or
information? Do I even have all the facts straight? Thanks.
Scott Hoffman
Graduate Student
schoffma at badlands.nodak.edu
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