# Copyright 2005 Nanorex, Inc. See LICENSE file for details. from bondage import * e,p,b = readmmp('ethane.mmp') bondsetup(b) dt=1e-16 massacc=array([dt*dt/elmass[x] for x in e]) n=p+massacc*force(p) x= os.times() ## print 'running...', ## for i in xrange(100000): ## o=p ## p=n ## n=2*p-o+massacc*force(p) ## print os.times()[0]-x[0]