mmpformat 080327 required; 080412 preferred kelvin 300 group (View Data) info opengroup open = True csys (HomeView) (1.000000, 0.000000, 0.000000, 0.000000) (10.000000) (0.000000, 0.000000, 0.000000) (1.000000) csys (LastView) (1.000000, 0.000000, 0.000000, 0.000000) (82.436064) (-20.608337, -9.986425, 0.000000) (1.000000) egroup (View Data) group (80bp_PAM3_4way_junction) info opengroup open = True group (DnaGroup1) DnaGroup info opengroup open = True group (DnaSegment1) DnaSegment info opengroup open = False forward_ref (319179232) # DnaSegmentMarker (DnaMarker1) mol (DnaAxisChunk876) def atom 1 (208) (-56285, 3481, -4581) def atom 2 (208) (-53105, 6555, -4877) def bond1 1 atom 3 (208) (-49925, 9216, -3310) def bond1 2 atom 4 (208) (-46745, 10447, -478) def bond1 3 atom 5 (208) (-43565, 9779, 2537) def bond1 4 atom 6 (208) (-40385, 7466, 4583) def bond1 5 atom 7 (208) (-37205, 4393, 4879) def bond1 6 atom 8 (208) (-34025, 1732, 3312) def bond1 7 atom 9 (208) (-30845, 499, 479) def bond1 8 atom 10 (208) (-27665, 1168, -2535) def bond1 9 atom 11 (208) (-24485, 3481, -4581) def bond1 10 atom 12 (208) (-21305, 6555, -4877) def bond1 11 atom 13 (208) (-18125, 9216, -3310) def bond1 12 atom 14 (208) (-14945, 10447, -478) def bond1 13 atom 15 (208) (-11765, 9779, 2537) def bond1 14 atom 16 (208) (-8585, 7466, 4583) def bond1 15 atom 17 (208) (-5405, 4393, 4879) def bond1 16 atom 18 (208) (-2225, 1732, 3312) def bond1 17 atom 19 (208) (953, 499, 479) def bond1 18 atom 20 (208) (4133, 1168, -2535) def bond1 19 atom 21 (0) (-58146, 1681, -4408) def bond1 1 atom 22 (0) (5995, 1559, -4300) def bond1 20 info chunk color = 128 128 128 DnaSegmentMarker (DnaMarker1) (127, 127, 127) 1 2 info leaf forwarded = 319179232 egroup (DnaSegment1) group (DnaStrand1) DnaStrand info opengroup open = True forward_ref (319264048) # DnaStrandMarker (DnaMarker2) mol (DnaStrandChunk1785) def atom 23 (202) (-57167, 13999, -4103) def atom 24 (201) (-56285, 11403, 160) def bond1 1 23 bond_direction 23 24 atom 25 (202) (-53974, 14741, 1570) def bond1 24 bond_direction 24 25 atom 26 (201) (-53105, 10177, 3615) def bond1 2 25 bond_direction 25 26 atom 27 (202) (-50794, 12048, 6717) def bond1 26 bond_direction 26 27 atom 28 (201) (-49925, 7154, 5689) def bond1 3 27 bond_direction 27 28 atom 29 (202) (-47614, 6845, 9299) def bond1 28 bond_direction 28 29 atom 30 (201) (-46745, 3489, 5590) def bond1 4 29 bond_direction 29 30 atom 31 (202) (-44434, 1117, 8329) def bond1 30 bond_direction 30 31 atom 32 (201) (-43565, 583, 3357) def bond1 5 31 bond_direction 31 32 atom 33 (202) (-41254, -2946, 4178) def bond1 32 bond_direction 32 33 atom 34 (201) (-40385, -455, -159) def bond1 6 33 bond_direction 33 34 atom 35 (202) (-38074, -3793, -1568) def bond1 34 bond_direction 34 35 atom 36 (201) (-37205, 770, -3613) def bond1 7 35 bond_direction 35 36 atom 37 (202) (-34894, -1100, -6715) def bond1 36 bond_direction 36 37 atom 38 (201) (-34025, 3793, -5687) def bond1 8 37 bond_direction 37 38 atom 39 (202) (-31714, 4102, -9297) def bond1 38 bond_direction 38 39 atom 40 (201) (-30845, 7458, -5588) def bond1 9 39 bond_direction 39 40 atom 41 (202) (-28534, 9830, -8327) def bond1 40 bond_direction 40 41 atom 42 (201) (-27665, 10364, -3355) def bond1 10 41 bond_direction 41 42 atom 43 (202) (-25354, 13893, -4176) def bond1 42 bond_direction 42 43 atom 44 (201) (-24485, 11403, 160) def bond1 11 43 bond_direction 43 44 atom 45 (202) (-22174, 14741, 1570) def bond1 44 bond_direction 44 45 atom 46 (201) (-21305, 10177, 3615) def bond1 12 45 bond_direction 45 46 atom 47 (202) (-18994, 12048, 6717) def bond1 46 bond_direction 46 47 atom 48 (201) (-18125, 7154, 5689) def bond1 13 47 bond_direction 47 48 atom 49 (202) (-15814, 6845, 9299) def bond1 48 bond_direction 48 49 atom 50 (201) (-14945, 3489, 5590) def bond1 14 49 bond_direction 49 50 atom 51 (202) (-12634, 1117, 8329) def bond1 50 bond_direction 50 51 atom 52 (201) (-11765, 583, 3357) def bond1 15 51 bond_direction 51 52 atom 53 (202) (-9454, -2946, 4178) def bond1 52 bond_direction 52 53 atom 54 (201) (-8585, -455, -159) def bond1 16 53 bond_direction 53 54 atom 55 (202) (-6274, -3793, -1568) def bond1 54 bond_direction 54 55 atom 56 (201) (-5405, 770, -3613) def bond1 17 55 bond_direction 55 56 atom 57 (202) (-3094, -1100, -6715) def bond1 56 bond_direction 56 57 atom 58 (201) (-2225, 3793, -5687) def bond1 18 57 bond_direction 57 58 atom 59 (202) (84, 4102, -9297) def bond1 58 bond_direction 58 59 atom 60 (201) (953, 7458, -5588) def bond1 19 59 bond_direction 59 60 atom 61 (202) (3264, 9830, -8327) def bond1 60 bond_direction 60 61 atom 62 (201) (4133, 10364, -3355) def bond1 20 61 bond_direction 61 62 atom 63 (0) (-57876, 15001, -2557) def bond1 23 bond_direction 63 23 info chunk color = 153 0 51 DnaStrandMarker (DnaMarker2) (127, 127, 127) 24 26 info leaf forwarded = 319264048 mol (DnaStrandChunk1783) def atom 64 (202) (6897, 15308, -4176) def bond1 62 bond_direction 62 64 atom 65 (201) (9934, 17710, 160) def bond1 64 bond_direction 64 65 atom 66 (202) (6596, 20021, 1570) def bond1 65 bond_direction 65 66 atom 67 (201) (11160, 20890, 3615) def bond1 66 bond_direction 66 67 atom 68 (202) (9289, 23201, 6717) def bond1 67 bond_direction 67 68 atom 69 (201) (14183, 24070, 5689) def bond1 68 bond_direction 68 69 atom 70 (202) (14492, 26381, 9299) def bond1 69 bond_direction 69 70 atom 71 (201) (17848, 27250, 5590) def bond1 70 bond_direction 70 71 atom 72 (202) (20221, 29561, 8329) def bond1 71 bond_direction 71 72 atom 73 (201) (20755, 30430, 3357) def bond1 72 bond_direction 72 73 atom 74 (202) (24285, 32741, 4178) def bond1 73 bond_direction 73 74 atom 75 (201) (21794, 33610, -158) def bond1 74 bond_direction 74 75 atom 76 (202) (25132, 35921, -1568) def bond1 75 bond_direction 75 76 atom 77 (201) (20568, 36790, -3613) def bond1 76 bond_direction 76 77 atom 78 (202) (22439, 39101, -6715) def bond1 77 bond_direction 77 78 atom 79 (201) (17544, 39970, -5687) def bond1 78 bond_direction 78 79 atom 80 (202) (17235, 42281, -9297) def bond1 79 bond_direction 79 80 atom 81 (201) (13879, 43150, -5588) def bond1 80 bond_direction 80 81 atom 82 (202) (11507, 45461, -8327) def bond1 81 bond_direction 81 82 atom 83 (201) (10973, 46330, -3355) def bond1 82 bond_direction 82 83 atom 84 (202) (7444, 48641, -4176) def bond1 83 bond_direction 83 84 atom 85 (201) (9934, 49510, 160) def bond1 84 bond_direction 84 85 atom 86 (202) (6596, 51821, 1570) def bond1 85 bond_direction 85 86 atom 87 (201) (11160, 52690, 3615) def bond1 86 bond_direction 86 87 atom 88 (202) (9289, 55001, 6717) def bond1 87 bond_direction 87 88 atom 89 (201) (14183, 55870, 5689) def bond1 88 bond_direction 88 89 atom 90 (202) (14492, 58181, 9299) def bond1 89 bond_direction 89 90 atom 91 (201) (17848, 59050, 5590) def bond1 90 bond_direction 90 91 atom 92 (202) (20221, 61361, 8329) def bond1 91 bond_direction 91 92 atom 93 (201) (20755, 62230, 3357) def bond1 92 bond_direction 92 93 atom 94 (202) (24285, 64541, 4178) def bond1 93 bond_direction 93 94 atom 95 (201) (21794, 65410, -158) def bond1 94 bond_direction 94 95 atom 96 (202) (25132, 67721, -1568) def bond1 95 bond_direction 95 96 atom 97 (201) (20568, 68590, -3613) def bond1 96 bond_direction 96 97 atom 98 (202) (22439, 70901, -6715) def bond1 97 bond_direction 97 98 atom 99 (201) (17544, 71770, -5687) def bond1 98 bond_direction 98 99 atom 100 (202) (17235, 74081, -9297) def bond1 99 bond_direction 99 100 atom 101 (201) (13879, 74950, -5588) def bond1 100 bond_direction 100 101 atom 102 (202) (11507, 77261, -8327) def bond1 101 bond_direction 101 102 atom 103 (201) (10973, 78130, -3355) def bond1 102 bond_direction 102 103 atom 104 (0) (8977, 82156, -2335) def bond1 103 bond_direction 103 104 info chunk color = 153 0 51 egroup (DnaStrand1) group (DnaStrand2) DnaStrand info opengroup open = True forward_ref (319273920) # DnaStrandMarker (DnaMarker3) mol (DnaStrandChunk1779) def atom 105 (202) (9206, -63672, 7962) def atom 106 (201) (13755, -62790, 5905) def bond1 105 bond_direction 105 106 atom 107 (202) (14748, -60479, 9390) def bond1 106 bond_direction 106 107 atom 108 (201) (17334, -59610, 5109) def bond1 107 bond_direction 107 108 atom 109 (202) (20185, -57299, 7344) def bond1 108 bond_direction 108 109 atom 110 (201) (19761, -56430, 2361) def bond1 109 bond_direction 109 110 atom 111 (202) (23382, -54119, 2494) def bond1 110 bond_direction 110 111 atom 112 (201) (20110, -53250, -1287) def bond1 111 bond_direction 111 112 atom 113 (202) (23117, -50939, -3308) def bond1 112 bond_direction 112 113 atom 114 (201) (18246, -50070, -4444) def bond1 113 bond_direction 113 114 atom 115 (202) (19491, -47759, -7847) def bond1 114 bond_direction 114 115 atom 116 (201) (14883, -46890, -5903) def bond1 115 bond_direction 115 116 atom 117 (202) (13890, -44579, -9388) def bond1 116 bond_direction 116 117 atom 118 (201) (11304, -43710, -5107) def bond1 117 bond_direction 117 118 atom 119 (202) (8452, -41399, -7342) def bond1 118 bond_direction 118 119 atom 120 (201) (8876, -40530, -2359) def bond1 119 bond_direction 119 120 atom 121 (202) (5256, -38219, -2492) def bond1 120 bond_direction 120 121 atom 122 (201) (8528, -37350, 1289) def bond1 121 bond_direction 121 122 atom 123 (202) (5521, -35039, 3310) def bond1 122 bond_direction 122 123 atom 124 (201) (10392, -34170, 4446) def bond1 123 bond_direction 123 124 atom 125 (202) (9147, -31859, 7849) def bond1 124 bond_direction 124 125 atom 126 (201) (13755, -30990, 5905) def bond1 125 bond_direction 125 126 atom 127 (202) (14748, -28679, 9390) def bond1 126 bond_direction 126 127 atom 128 (201) (17334, -27810, 5109) def bond1 127 bond_direction 127 128 atom 129 (202) (20185, -25499, 7344) def bond1 128 bond_direction 128 129 atom 130 (201) (19761, -24630, 2361) def bond1 129 bond_direction 129 130 atom 131 (202) (23382, -22319, 2494) def bond1 130 bond_direction 130 131 atom 132 (201) (20110, -21450, -1287) def bond1 131 bond_direction 131 132 atom 133 (202) (23117, -19139, -3308) def bond1 132 bond_direction 132 133 atom 134 (201) (18246, -18270, -4444) def bond1 133 bond_direction 133 134 atom 135 (202) (19491, -15959, -7847) def bond1 134 bond_direction 134 135 atom 136 (201) (14883, -15090, -5903) def bond1 135 bond_direction 135 136 atom 137 (202) (13890, -12779, -9388) def bond1 136 bond_direction 136 137 atom 138 (201) (11304, -11910, -5107) def bond1 137 bond_direction 137 138 atom 139 (202) (8452, -9599, -7342) def bond1 138 bond_direction 138 139 atom 140 (201) (8876, -8730, -2359) def bond1 139 bond_direction 139 140 atom 141 (202) (5256, -6419, -2492) def bond1 140 bond_direction 140 141 atom 142 (201) (8528, -5550, 1289) def bond1 141 bond_direction 141 142 atom 143 (202) (5521, -3239, 3310) def bond1 142 bond_direction 142 143 atom 144 (201) (10392, -2370, 4446) def bond1 143 bond_direction 143 144 atom 145 (0) (10619, -64381, 9145) def bond1 105 bond_direction 145 105 info chunk color = 0 255 127 mol (DnaStrandChunk1786) def atom 146 (201) (-56285, 1547, 4446) def bond1 1 atom 147 (202) (-55416, -3323, 3310) def bond1 146 bond_direction 147 146 atom 148 (201) (-53105, -316, 1289) def bond1 2 147 bond_direction 148 147 atom 149 (202) (-52236, -3588, -2492) def bond1 148 bond_direction 149 148 atom 150 (201) (-49925, 32, -2359) def bond1 3 149 bond_direction 150 149 atom 151 (202) (-49056, -392, -7342) def bond1 150 bond_direction 151 150 atom 152 (201) (-46745, 2458, -5107) def bond1 4 151 bond_direction 152 151 atom 153 (202) (-45876, 5044, -9388) def bond1 152 bond_direction 153 152 atom 154 (201) (-43565, 6038, -5903) def bond1 5 153 bond_direction 154 153 atom 155 (202) (-42696, 10645, -7847) def bond1 154 bond_direction 155 154 atom 156 (201) (-40385, 9400, -4444) def bond1 6 155 bond_direction 156 155 atom 157 (202) (-39516, 14271, -3308) def bond1 156 bond_direction 157 156 atom 158 (201) (-37205, 11265, -1287) def bond1 7 157 bond_direction 158 157 atom 159 (202) (-36336, 14537, 2494) def bond1 158 bond_direction 159 158 atom 160 (201) (-34025, 10916, 2361) def bond1 8 159 bond_direction 160 159 atom 161 (202) (-33156, 11340, 7344) def bond1 160 bond_direction 161 160 atom 162 (201) (-30845, 8488, 5109) def bond1 9 161 bond_direction 162 161 atom 163 (202) (-29976, 5902, 9390) def bond1 162 bond_direction 163 162 atom 164 (201) (-27665, 4909, 5905) def bond1 10 163 bond_direction 164 163 atom 165 (202) (-26796, 302, 7849) def bond1 164 bond_direction 165 164 atom 166 (201) (-24485, 1547, 4446) def bond1 11 165 bond_direction 166 165 atom 167 (202) (-23616, -3323, 3310) def bond1 166 bond_direction 167 166 atom 168 (201) (-21305, -316, 1289) def bond1 12 167 bond_direction 168 167 atom 169 (202) (-20436, -3588, -2492) def bond1 168 bond_direction 169 168 atom 170 (201) (-18125, 32, -2359) def bond1 13 169 bond_direction 170 169 atom 171 (202) (-17256, -392, -7342) def bond1 170 bond_direction 171 170 atom 172 (201) (-14945, 2458, -5107) def bond1 14 171 bond_direction 172 171 atom 173 (202) (-14076, 5044, -9388) def bond1 172 bond_direction 173 172 atom 174 (201) (-11765, 6038, -5903) def bond1 15 173 bond_direction 174 173 atom 175 (202) (-10896, 10645, -7847) def bond1 174 bond_direction 175 174 atom 176 (201) (-8585, 9400, -4444) def bond1 16 175 bond_direction 176 175 atom 177 (202) (-7716, 14271, -3308) def bond1 176 bond_direction 177 176 atom 178 (201) (-5405, 11265, -1287) def bond1 17 177 bond_direction 178 177 atom 179 (202) (-4536, 14537, 2494) def bond1 178 bond_direction 179 178 atom 180 (201) (-2225, 10916, 2361) def bond1 18 179 bond_direction 180 179 atom 181 (202) (-1356, 11340, 7344) def bond1 180 bond_direction 181 180 atom 182 (201) (953, 8488, 5109) def bond1 19 181 bond_direction 182 181 atom 183 (202) (1822, 5902, 9390) def bond1 182 bond_direction 183 182 atom 184 (201) (4133, 4909, 5905) def bond1 20 183 bond_direction 184 183 atom 185 (202) (7051, 157, 7849) def bond1 144 184 bond_direction 144 185 bond_direction 185 184 atom 186 (0) (-60311, 2315, 6552) def bond1 146 bond_direction 146 186 info chunk color = 0 255 127 DnaStrandMarker (DnaMarker3) (0, 255, 127) 146 148 info leaf forwarded = 319273920 egroup (DnaStrand2) group (DnaSegment4) DnaSegment info opengroup open = False forward_ref (152781688) # DnaSegmentMarker (DnaMarker10) mol (DnaAxisChunk875) def atom 187 (208) (17857, 17710, -4581) def bond1 65 atom 188 (208) (14783, 20890, -4877) def bond1 67 187 atom 189 (208) (12122, 24070, -3310) def bond1 69 188 atom 190 (208) (10890, 27250, -478) def bond1 71 189 atom 191 (208) (11558, 30430, 2537) def bond1 73 190 atom 192 (208) (13872, 33610, 4583) def bond1 75 191 atom 193 (208) (16945, 36790, 4879) def bond1 77 192 atom 194 (208) (19605, 39970, 3312) def bond1 79 193 atom 195 (208) (20838, 43150, 479) def bond1 81 194 atom 196 (208) (20169, 46330, -2535) def bond1 83 195 atom 197 (208) (17857, 49510, -4581) def bond1 85 196 atom 198 (208) (14783, 52690, -4877) def bond1 87 197 atom 199 (208) (12122, 55870, -3310) def bond1 89 198 atom 200 (208) (10890, 59050, -478) def bond1 91 199 atom 201 (208) (11558, 62230, 2537) def bond1 93 200 atom 202 (208) (13872, 65410, 4583) def bond1 95 201 atom 203 (208) (16945, 68590, 4879) def bond1 97 202 atom 204 (208) (19605, 71770, 3312) def bond1 99 203 atom 205 (208) (20838, 74950, 479) def bond1 101 204 atom 206 (208) (20169, 78130, -2535) def bond1 103 205 atom 207 (0) (19656, 15848, -4408) def bond1 187 atom 208 (0) (19778, 79992, -4300) def bond1 206 info chunk color = 128 128 128 DnaSegmentMarker (DnaMarker10) (127, 127, 127) 187 188 info leaf forwarded = 152781688 egroup (DnaSegment4) group (DnaStrand8) DnaStrand info opengroup open = True forward_ref (152787264) # DnaStrandMarker (DnaMarker12) mol (DnaStrandChunk1781) def atom 209 (202) (22673, 14853, 1815) def atom 210 (201) (25132, 11723, 160) def bond1 209 bond_direction 209 210 atom 211 (202) (27443, 15061, 1570) def bond1 210 bond_direction 210 211 atom 212 (201) (28312, 10497, 3615) def bond1 211 bond_direction 211 212 atom 213 (202) (30623, 12368, 6717) def bond1 212 bond_direction 212 213 atom 214 (201) (31492, 7474, 5689) def bond1 213 bond_direction 213 214 atom 215 (202) (33803, 7165, 9299) def bond1 214 bond_direction 214 215 atom 216 (201) (34672, 3809, 5590) def bond1 215 bond_direction 215 216 atom 217 (202) (36983, 1437, 8329) def bond1 216 bond_direction 216 217 atom 218 (201) (37852, 903, 3357) def bond1 217 bond_direction 217 218 atom 219 (202) (40163, -2626, 4178) def bond1 218 bond_direction 218 219 atom 220 (201) (41032, -135, -159) def bond1 219 bond_direction 219 220 atom 221 (202) (43343, -3473, -1568) def bond1 220 bond_direction 220 221 atom 222 (201) (44212, 1090, -3613) def bond1 221 bond_direction 221 222 atom 223 (202) (46523, -780, -6715) def bond1 222 bond_direction 222 223 atom 224 (201) (47392, 4113, -5687) def bond1 223 bond_direction 223 224 atom 225 (202) (49703, 4422, -9297) def bond1 224 bond_direction 224 225 atom 226 (201) (50572, 7778, -5588) def bond1 225 bond_direction 225 226 atom 227 (202) (52883, 10150, -8327) def bond1 226 bond_direction 226 227 atom 228 (201) (53752, 10684, -3355) def bond1 227 bond_direction 227 228 atom 229 (202) (56063, 14213, -4176) def bond1 228 bond_direction 228 229 atom 230 (201) (56932, 11723, 160) def bond1 229 bond_direction 229 230 atom 231 (202) (59243, 15061, 1570) def bond1 230 bond_direction 230 231 atom 232 (201) (60112, 10497, 3615) def bond1 231 bond_direction 231 232 atom 233 (202) (62423, 12368, 6717) def bond1 232 bond_direction 232 233 atom 234 (201) (63292, 7474, 5689) def bond1 233 bond_direction 233 234 atom 235 (202) (65603, 7165, 9299) def bond1 234 bond_direction 234 235 atom 236 (201) (66472, 3809, 5590) def bond1 235 bond_direction 235 236 atom 237 (202) (68783, 1437, 8329) def bond1 236 bond_direction 236 237 atom 238 (201) (69652, 903, 3357) def bond1 237 bond_direction 237 238 atom 239 (202) (71963, -2626, 4178) def bond1 238 bond_direction 238 239 atom 240 (201) (72832, -135, -159) def bond1 239 bond_direction 239 240 atom 241 (202) (75143, -3473, -1568) def bond1 240 bond_direction 240 241 atom 242 (201) (76012, 1090, -3613) def bond1 241 bond_direction 241 242 atom 243 (202) (78323, -780, -6715) def bond1 242 bond_direction 242 243 atom 244 (201) (79192, 4113, -5687) def bond1 243 bond_direction 243 244 atom 245 (202) (81503, 4422, -9297) def bond1 244 bond_direction 244 245 atom 246 (201) (82372, 7778, -5588) def bond1 245 bond_direction 245 246 atom 247 (202) (84683, 10150, -8327) def bond1 246 bond_direction 246 247 atom 248 (201) (85552, 10684, -3355) def bond1 247 bond_direction 247 248 atom 249 (0) (89578, 12680, -2335) def bond1 248 bond_direction 248 249 info chunk color = 255 170 0 mol (DnaStrandChunk1784) def atom 250 (201) (19791, 17710, 4446) def bond1 187 209 bond_direction 250 209 atom 251 (202) (24662, 18579, 3310) def bond1 250 bond_direction 251 250 atom 252 (201) (21655, 20890, 1289) def bond1 188 251 bond_direction 252 251 atom 253 (202) (24927, 21759, -2492) def bond1 252 bond_direction 253 252 atom 254 (201) (21306, 24070, -2359) def bond1 189 253 bond_direction 254 253 atom 255 (202) (21730, 24939, -7342) def bond1 254 bond_direction 255 254 atom 256 (201) (18879, 27250, -5107) def bond1 190 255 bond_direction 256 255 atom 257 (202) (16293, 28119, -9388) def bond1 256 bond_direction 257 256 atom 258 (201) (15300, 30430, -5903) def bond1 191 257 bond_direction 258 257 atom 259 (202) (10692, 31299, -7847) def bond1 258 bond_direction 259 258 atom 260 (201) (11937, 33610, -4444) def bond1 192 259 bond_direction 260 259 atom 261 (202) (7066, 34479, -3308) def bond1 260 bond_direction 261 260 atom 262 (201) (10073, 36790, -1287) def bond1 193 261 bond_direction 262 261 atom 263 (202) (6801, 37659, 2494) def bond1 262 bond_direction 263 262 atom 264 (201) (10421, 39970, 2361) def bond1 194 263 bond_direction 264 263 atom 265 (202) (9997, 40839, 7344) def bond1 264 bond_direction 265 264 atom 266 (201) (12849, 43150, 5109) def bond1 195 265 bond_direction 266 265 atom 267 (202) (15435, 44019, 9390) def bond1 266 bond_direction 267 266 atom 268 (201) (16428, 46330, 5905) def bond1 196 267 bond_direction 268 267 atom 269 (202) (21036, 47199, 7849) def bond1 268 bond_direction 269 268 atom 270 (201) (19791, 49510, 4446) def bond1 197 269 bond_direction 270 269 atom 271 (202) (24662, 50379, 3310) def bond1 270 bond_direction 271 270 atom 272 (201) (21655, 52690, 1289) def bond1 198 271 bond_direction 272 271 atom 273 (202) (24927, 53559, -2492) def bond1 272 bond_direction 273 272 atom 274 (201) (21306, 55870, -2359) def bond1 199 273 bond_direction 274 273 atom 275 (202) (21730, 56739, -7342) def bond1 274 bond_direction 275 274 atom 276 (201) (18879, 59050, -5107) def bond1 200 275 bond_direction 276 275 atom 277 (202) (16293, 59919, -9388) def bond1 276 bond_direction 277 276 atom 278 (201) (15300, 62230, -5903) def bond1 201 277 bond_direction 278 277 atom 279 (202) (10692, 63099, -7847) def bond1 278 bond_direction 279 278 atom 280 (201) (11937, 65410, -4444) def bond1 202 279 bond_direction 280 279 atom 281 (202) (7066, 66279, -3308) def bond1 280 bond_direction 281 280 atom 282 (201) (10073, 68590, -1287) def bond1 203 281 bond_direction 282 281 atom 283 (202) (6801, 69459, 2494) def bond1 282 bond_direction 283 282 atom 284 (201) (10421, 71770, 2361) def bond1 204 283 bond_direction 284 283 atom 285 (202) (9997, 72639, 7344) def bond1 284 bond_direction 285 284 atom 286 (201) (12849, 74950, 5109) def bond1 205 285 bond_direction 286 285 atom 287 (202) (15435, 75819, 9390) def bond1 286 bond_direction 287 286 atom 288 (201) (16428, 78130, 5905) def bond1 206 287 bond_direction 288 287 atom 289 (202) (20976, 79012, 7962) def bond1 288 bond_direction 289 288 atom 290 (0) (19563, 79721, 9145) def bond1 289 bond_direction 290 289 info chunk color = 255 170 0 DnaStrandMarker (DnaMarker12) (255, 170, 0) 250 252 info leaf forwarded = 152787264 egroup (DnaStrand8) group (DnaSegment5) DnaSegment info opengroup open = False forward_ref (152822048) # DnaSegmentMarker (DnaMarker13) mol (DnaAxisChunk874) def atom 291 (208) (25132, 3801, -4581) def bond1 210 atom 292 (208) (28312, 6875, -4877) def bond1 212 291 atom 293 (208) (31492, 9536, -3310) def bond1 214 292 atom 294 (208) (34672, 10768, -477) def bond1 216 293 atom 295 (208) (37852, 10099, 2537) def bond1 218 294 atom 296 (208) (41032, 7786, 4583) def bond1 220 295 atom 297 (208) (44212, 4713, 4879) def bond1 222 296 atom 298 (208) (47392, 2052, 3312) def bond1 224 297 atom 299 (208) (50572, 819, 479) def bond1 226 298 atom 300 (208) (53752, 1488, -2535) def bond1 228 299 atom 301 (208) (56932, 3801, -4581) def bond1 230 300 atom 302 (208) (60112, 6875, -4877) def bond1 232 301 atom 303 (208) (63292, 9536, -3310) def bond1 234 302 atom 304 (208) (66472, 10768, -477) def bond1 236 303 atom 305 (208) (69652, 10099, 2537) def bond1 238 304 atom 306 (208) (72832, 7786, 4583) def bond1 240 305 atom 307 (208) (76012, 4713, 4879) def bond1 242 306 atom 308 (208) (79192, 2052, 3312) def bond1 244 307 atom 309 (208) (82372, 819, 479) def bond1 246 308 atom 310 (208) (85552, 1488, -2535) def bond1 248 309 atom 311 (0) (23271, 2001, -4408) def bond1 291 atom 312 (0) (87414, 1879, -4300) def bond1 310 info chunk color = 128 128 128 DnaSegmentMarker (DnaMarker13) (127, 127, 127) 291 292 info leaf forwarded = 152822048 egroup (DnaSegment5) group (DnaStrand10) DnaStrand info opengroup open = True forward_ref (152831520) # DnaStrandMarker (DnaMarker15) mol (DnaStrandChunk1780) def atom 313 (201) (19210, -62790, -3355) def atom 314 (202) (18676, -61921, -8327) def bond1 313 bond_direction 314 313 atom 315 (201) (16303, -59610, -5588) def bond1 314 bond_direction 315 314 atom 316 (202) (12947, -58741, -9297) def bond1 315 bond_direction 316 315 atom 317 (201) (12638, -56430, -5687) def bond1 316 bond_direction 317 316 atom 318 (202) (7744, -55561, -6715) def bond1 317 bond_direction 318 317 atom 319 (201) (9615, -53250, -3613) def bond1 318 bond_direction 319 318 atom 320 (202) (5051, -52381, -1568) def bond1 319 bond_direction 320 319 atom 321 (201) (8389, -50070, -158) def bond1 320 bond_direction 321 320 atom 322 (202) (5898, -49201, 4178) def bond1 321 bond_direction 322 321 atom 323 (201) (9428, -46890, 3357) def bond1 322 bond_direction 323 322 atom 324 (202) (9962, -46021, 8329) def bond1 323 bond_direction 324 323 atom 325 (201) (12334, -43710, 5590) def bond1 324 bond_direction 325 324 atom 326 (202) (15690, -42841, 9299) def bond1 325 bond_direction 326 325 atom 327 (201) (15999, -40530, 5689) def bond1 326 bond_direction 327 326 atom 328 (202) (20894, -39661, 6717) def bond1 327 bond_direction 328 327 atom 329 (201) (19023, -37350, 3615) def bond1 328 bond_direction 329 328 atom 330 (202) (23587, -36481, 1570) def bond1 329 bond_direction 330 329 atom 331 (201) (20249, -34170, 160) def bond1 330 bond_direction 331 330 atom 332 (202) (22739, -33301, -4176) def bond1 331 bond_direction 332 331 atom 333 (201) (19210, -30990, -3355) def bond1 332 bond_direction 333 332 atom 334 (202) (18676, -30121, -8327) def bond1 333 bond_direction 334 333 atom 335 (201) (16303, -27810, -5588) def bond1 334 bond_direction 335 334 atom 336 (202) (12947, -26941, -9297) def bond1 335 bond_direction 336 335 atom 337 (201) (12638, -24630, -5687) def bond1 336 bond_direction 337 336 atom 338 (202) (7744, -23761, -6715) def bond1 337 bond_direction 338 337 atom 339 (201) (9615, -21450, -3613) def bond1 338 bond_direction 339 338 atom 340 (202) (5051, -20581, -1568) def bond1 339 bond_direction 340 339 atom 341 (201) (8389, -18270, -158) def bond1 340 bond_direction 341 340 atom 342 (202) (5898, -17401, 4178) def bond1 341 bond_direction 342 341 atom 343 (201) (9428, -15090, 3357) def bond1 342 bond_direction 343 342 atom 344 (202) (9962, -14221, 8329) def bond1 343 bond_direction 344 343 atom 345 (201) (12334, -11910, 5590) def bond1 344 bond_direction 345 344 atom 346 (202) (15690, -11041, 9299) def bond1 345 bond_direction 346 345 atom 347 (201) (15999, -8730, 5689) def bond1 346 bond_direction 347 346 atom 348 (202) (20894, -7861, 6717) def bond1 347 bond_direction 348 347 atom 349 (201) (19023, -5550, 3615) def bond1 348 bond_direction 349 348 atom 350 (202) (23587, -4681, 1570) def bond1 349 bond_direction 350 349 atom 351 (201) (20249, -2370, 160) def bond1 350 bond_direction 351 350 atom 352 (202) (22827, -462, 1815) def bond1 351 bond_direction 352 351 atom 353 (0) (21207, -66816, -2335) def bond1 313 bond_direction 313 353 info chunk color = 0 0 153 mol (DnaStrandChunk1782) def atom 354 (201) (25132, 1867, 4446) def bond1 291 352 bond_direction 354 352 atom 355 (202) (26001, -3003, 3310) def bond1 354 bond_direction 355 354 atom 356 (201) (28312, 3, 1289) def bond1 292 355 bond_direction 356 355 atom 357 (202) (29181, -3268, -2492) def bond1 356 bond_direction 357 356 atom 358 (201) (31492, 352, -2359) def bond1 293 357 bond_direction 358 357 atom 359 (202) (32361, -71, -7342) def bond1 358 bond_direction 359 358 atom 360 (201) (34672, 2779, -5107) def bond1 294 359 bond_direction 360 359 atom 361 (202) (35541, 5365, -9388) def bond1 360 bond_direction 361 360 atom 362 (201) (37852, 6358, -5903) def bond1 295 361 bond_direction 362 361 atom 363 (202) (38721, 10965, -7847) def bond1 362 bond_direction 363 362 atom 364 (201) (41032, 9720, -4444) def bond1 296 363 bond_direction 364 363 atom 365 (202) (41901, 14591, -3308) def bond1 364 bond_direction 365 364 atom 366 (201) (44212, 11585, -1287) def bond1 297 365 bond_direction 366 365 atom 367 (202) (45081, 14857, 2494) def bond1 366 bond_direction 367 366 atom 368 (201) (47392, 11236, 2361) def bond1 298 367 bond_direction 368 367 atom 369 (202) (48261, 11660, 7344) def bond1 368 bond_direction 369 368 atom 370 (201) (50572, 8808, 5109) def bond1 299 369 bond_direction 370 369 atom 371 (202) (51441, 6222, 9390) def bond1 370 bond_direction 371 370 atom 372 (201) (53752, 5229, 5905) def bond1 300 371 bond_direction 372 371 atom 373 (202) (54621, 622, 7849) def bond1 372 bond_direction 373 372 atom 374 (201) (56932, 1867, 4446) def bond1 301 373 bond_direction 374 373 atom 375 (202) (57801, -3003, 3310) def bond1 374 bond_direction 375 374 atom 376 (201) (60112, 3, 1289) def bond1 302 375 bond_direction 376 375 atom 377 (202) (60981, -3268, -2492) def bond1 376 bond_direction 377 376 atom 378 (201) (63292, 352, -2359) def bond1 303 377 bond_direction 378 377 atom 379 (202) (64161, -71, -7342) def bond1 378 bond_direction 379 378 atom 380 (201) (66472, 2779, -5107) def bond1 304 379 bond_direction 380 379 atom 381 (202) (67341, 5365, -9388) def bond1 380 bond_direction 381 380 atom 382 (201) (69652, 6358, -5903) def bond1 305 381 bond_direction 382 381 atom 383 (202) (70521, 10965, -7847) def bond1 382 bond_direction 383 382 atom 384 (201) (72832, 9720, -4444) def bond1 306 383 bond_direction 384 383 atom 385 (202) (73701, 14591, -3308) def bond1 384 bond_direction 385 384 atom 386 (201) (76012, 11585, -1287) def bond1 307 385 bond_direction 386 385 atom 387 (202) (76881, 14857, 2494) def bond1 386 bond_direction 387 386 atom 388 (201) (79192, 11236, 2361) def bond1 308 387 bond_direction 388 387 atom 389 (202) (80061, 11660, 7344) def bond1 388 bond_direction 389 388 atom 390 (201) (82372, 8808, 5109) def bond1 309 389 bond_direction 390 389 atom 391 (202) (83241, 6222, 9390) def bond1 390 bond_direction 391 390 atom 392 (201) (85552, 5229, 5905) def bond1 310 391 bond_direction 392 391 atom 393 (202) (86434, 681, 7962) def bond1 392 bond_direction 393 392 atom 394 (0) (87143, 2094, 9145) def bond1 393 bond_direction 394 393 info chunk color = 0 0 153 DnaStrandMarker (DnaMarker15) (127, 127, 127) 354 356 info leaf forwarded = 152831520 egroup (DnaStrand10) group (DnaSegment6) DnaSegment info opengroup open = False forward_ref (152871400) # DnaSegmentMarker (DnaMarker16) mol (DnaAxisChunk873) def atom 395 (208) (10013, -62790, -2535) def bond1 313 106 atom 396 (208) (9345, -59610, 480) def bond1 315 108 395 atom 397 (208) (10577, -56430, 3312) def bond1 317 110 396 atom 398 (208) (13238, -53250, 4879) def bond1 319 112 397 atom 399 (208) (16311, -50070, 4583) def bond1 321 114 398 atom 400 (208) (18624, -46890, 2537) def bond1 323 116 399 atom 401 (208) (19293, -43710, -477) def bond1 325 118 400 atom 402 (208) (18060, -40530, -3310) def bond1 327 120 401 atom 403 (208) (15400, -37350, -4877) def bond1 329 122 402 atom 404 (208) (12326, -34170, -4581) def bond1 331 124 403 atom 405 (208) (10013, -30990, -2535) def bond1 333 126 404 atom 406 (208) (9345, -27810, 480) def bond1 335 128 405 atom 407 (208) (10577, -24630, 3312) def bond1 337 130 406 atom 408 (208) (13238, -21450, 4879) def bond1 339 132 407 atom 409 (208) (16311, -18270, 4583) def bond1 341 134 408 atom 410 (208) (18624, -15090, 2537) def bond1 343 136 409 atom 411 (208) (19293, -11910, -477) def bond1 345 138 410 atom 412 (208) (18060, -8730, -3310) def bond1 347 140 411 atom 413 (208) (15400, -5550, -4877) def bond1 349 142 412 atom 414 (208) (12326, -2370, -4581) def bond1 351 144 413 atom 415 (0) (10405, -64651, -4300) def bond1 395 atom 416 (0) (10527, -508, -4408) def bond1 414 info chunk color = 128 128 128 DnaSegmentMarker (DnaMarker16) (127, 127, 127) 414 413 info leaf forwarded = 152871400 egroup (DnaSegment6) egroup (DnaGroup1) egroup (80bp_PAM3_4way_junction) end1 group (Clipboard) info opengroup open = False egroup (Clipboard) end molecular machine part 80bp_PAM3_4way_junction