mmpformat 080327 required; 080412 preferred
kelvin 300
group (View Data)
info opengroup open = True
csys (HomeView) (1.000000, 0.000000, 0.000000, 0.000000) (10.000000) (0.000000, 0.000000, 0.000000) (1.000000)
csys (LastView) (1.000000, 0.000000, 0.000000, 0.000000) (111.277047) (-20.608337, -9.986425, 0.000000) (1.000000)
egroup (View Data)
group (60bp_PAM3_3way_junction)
info opengroup open = True
group (DnaGroup1) DnaGroup
info opengroup open = True
group (DnaSegment1) DnaSegment
info opengroup open = False
forward_ref (96570384) # DnaSegmentMarker (DnaMarker1)
mol (DnaAxisChunk5) def
atom 1 (300) (-83780, 5473, 0) def
atom 2 (300) (-80600, 5473, 0) def
bond1 1
atom 3 (300) (-77420, 5473, 0) def
bond1 2
atom 4 (300) (-74240, 5473, 0) def
bond1 3
atom 5 (300) (-55627, 9730, 0) def
bond1 4
atom 6 (300) (-52447, 9730, 0) def
bond1 5
atom 7 (300) (-49267, 9730, 0) def
bond1 6
atom 8 (300) (-46087, 9730, 0) def
bond1 7
atom 9 (300) (-33861, -3041, 0) def
bond1 8
atom 10 (300) (-30681, -3041, 0) def
bond1 9
atom 11 (300) (-27501, -3041, 0) def
bond1 10
atom 12 (300) (-24321, -3041, 0) def
bond1 11
atom 13 (300) (-21141, 14697, 0) def
bond1 12
atom 14 (300) (-17961, 14697, 0) def
bond1 13
atom 15 (300) (-14781, 14697, 0) def
bond1 14
atom 16 (300) (-11601, 14697, 0) def
bond1 15
atom 17 (300) (-2567, -912, 0) def
bond1 16
atom 18 (300) (612, -912, 0) def
bond1 17
atom 19 (300) (3791, -912, 0) def
bond1 18
atom 20 (300) (6971, -912, 0) def
bond1 19
atom 21 (0) (-85370, 5473, 0) def
bond1 1
atom 22 (0) (8561, -912, 0) def
bond1 20
info chunk color = 128 128 128
DnaSegmentMarker (DnaMarker1) (127, 127, 127) 1 2
info leaf forwarded = 96570384
egroup (DnaSegment1)
group (DnaStrand1) DnaStrand
info opengroup open = True
forward_ref (97631488) # DnaStrandMarker (DnaMarker2)
mol (DnaStrandChunk7) def
atom 23 (301) (15426, 21987, 0) def
atom 24 (301) (18608, 23645, 5112) def
bond1 23
bond_direction 23 24
atom 25 (301) (23993, 23766, 8271) def
bond1 24
bond_direction 24 25
atom 26 (301) (30221, 23299, 8271) def
bond1 25
bond_direction 25 26
atom 27 (301) (35607, 23419, 5112) def
bond1 26
bond_direction 26 27
atom 28 (301) (38789, 25077, 0) def
bond1 27
bond_direction 27 28
atom 29 (301) (39246, 28636, -5110) def
bond1 28
bond_direction 28 29
atom 30 (301) (35910, 41936, -8269) def
bond1 29
bond_direction 29 30
atom 31 (301) (33321, 47619, -8269) def
bond1 30
bond_direction 30 31
atom 32 (301) (31574, 52715, -5110) def
bond1 31
bond_direction 31 32
atom 33 (301) (32031, 56273, 0) def
bond1 32
bond_direction 32 33
atom 34 (301) (35212, 57931, 5112) def
bond1 33
bond_direction 33 34
atom 35 (301) (47743, 57522, 8271) def
bond1 34
bond_direction 34 35
atom 36 (301) (53971, 57055, 8271) def
bond1 35
bond_direction 35 36
atom 37 (301) (59357, 57175, 5112) def
bond1 36
bond_direction 36 37
atom 38 (301) (62538, 58833, 0) def
bond1 37
bond_direction 37 38
atom 39 (301) (62995, 62392, -5110) def
bond1 38
bond_direction 38 39
atom 40 (301) (72627, 94481, -8269) def
bond1 39
bond_direction 39 40
atom 41 (301) (70038, 100164, -8269) def
bond1 40
bond_direction 40 41
atom 42 (301) (68290, 105260, -5110) def
bond1 41
bond_direction 41 42
atom 43 (0) (67416, 107809, -3529) def
bond1 42
bond_direction 42 43
info chunk color = 153 0 51
mol (DnaStrandChunk9) def
atom 44 (301) (-83780, 14170, 0) def
bond1 1
atom 45 (301) (-80600, 12509, 5112) def
bond1 2 44
bond_direction 44 45
atom 46 (301) (-77420, 8161, 8271) def
bond1 3 45
bond_direction 45 46
atom 47 (301) (-74240, 2786, 8271) def
bond1 4 46
bond_direction 46 47
atom 48 (301) (-55627, 2695, 5112) def
bond1 5 47
bond_direction 47 48
atom 49 (301) (-52447, 1034, 0) def
bond1 6 48
bond_direction 48 49
atom 50 (301) (-49267, 2695, -5110) def
bond1 7 49
bond_direction 49 50
atom 51 (301) (-46087, 7043, -8269) def
bond1 8 50
bond_direction 50 51
atom 52 (301) (-33861, -353, -8269) def
bond1 9 51
bond_direction 51 52
atom 53 (301) (-30681, 3994, -5110) def
bond1 10 52
bond_direction 52 53
atom 54 (301) (-27501, 5655, 0) def
bond1 11 53
bond_direction 53 54
atom 55 (301) (-24321, 3994, 5112) def
bond1 12 54
bond_direction 54 55
atom 56 (301) (-21141, 17385, 8271) def
bond1 13 55
bond_direction 55 56
atom 57 (301) (-17961, 12010, 8271) def
bond1 14 56
bond_direction 56 57
atom 58 (301) (-14781, 7662, 5112) def
bond1 15 57
bond_direction 57 58
atom 59 (301) (-11601, 6001, 0) def
bond1 16 58
bond_direction 58 59
atom 60 (301) (-2567, -7947, -5110) def
bond1 17 59
bond_direction 59 60
atom 61 (301) (612, -3599, -8269) def
bond1 18 60
bond_direction 60 61
atom 62 (301) (3791, 1775, -8269) def
bond1 19 61
bond_direction 61 62
atom 63 (301) (6971, 6123, -5110) def
bond1 20 62 23
bond_direction 62 63
bond_direction 63 23
atom 64 (0) (-85371, 15001, -2557) def
bond1 44
bond_direction 64 44
info chunk color = 153 0 51
DnaStrandMarker (DnaMarker2) (127, 127, 127) 44 45
info leaf forwarded = 97631488
egroup (DnaStrand1)
group (DnaStrand2) DnaStrand
info opengroup open = True
forward_ref (97654424) # DnaStrandMarker (DnaMarker3)
mol (DnaStrandChunk10) def
atom 65 (301) (-83780, -456, 6361) def
bond1 1
atom 66 (301) (-80600, -3062, 1660) def
bond1 2 65
bond_direction 66 65
atom 67 (301) (-77420, -2407, -3673) def
bond1 3 66
bond_direction 67 66
atom 68 (301) (-74240, 1256, -7604) def
bond1 4 67
bond_direction 68 67
atom 69 (301) (-55627, 10790, -8630) def
bond1 5 68
bond_direction 69 68
atom 70 (301) (-52447, 15661, -6359) def
bond1 6 69
bond_direction 70 69
atom 71 (301) (-49267, 18268, -1658) def
bond1 7 70
bond_direction 71 70
atom 72 (301) (-46087, 17613, 3675) def
bond1 8 71
bond_direction 72 71
atom 73 (301) (-33861, 1175, 7606) def
bond1 9 72
bond_direction 73 72
atom 74 (301) (-30681, -4100, 8632) def
bond1 10 73
bond_direction 74 73
atom 75 (301) (-27501, -8971, 6361) def
bond1 11 74
bond_direction 75 74
atom 76 (301) (-24321, -11577, 1660) def
bond1 12 75
bond_direction 76 75
atom 77 (301) (-21141, 6816, -3673) def
bond1 13 76
bond_direction 77 76
atom 78 (301) (-17961, 10480, -7604) def
bond1 14 77
bond_direction 78 77
atom 79 (301) (-14781, 15757, -8630) def
bond1 15 78
bond_direction 79 78
atom 80 (301) (-11601, 20628, -6359) def
bond1 16 79
bond_direction 80 79
atom 81 (301) (-2567, 7625, -1658) def
bond1 17 80
bond_direction 81 80
atom 82 (301) (612, 6970, 3675) def
bond1 18 81
bond_direction 82 81
atom 83 (301) (3791, 3304, 7606) def
bond1 19 82
bond_direction 83 82
atom 84 (301) (6971, -1971, 8632) def
bond1 20 83
bond_direction 84 83
atom 85 (0) (-85371, 847, 8713) def
bond1 65
bond_direction 65 85
info chunk color = 0 0 153
DnaStrandMarker (DnaMarker3) (127, 127, 127) 65 66
info leaf forwarded = 97654424
mol (DnaStrandChunk11) def
atom 86 (301) (71314, -61023, 8632) def
atom 87 (301) (73323, -55199, 7606) def
bond1 86
bond_direction 86 87
atom 88 (301) (74097, -50408, 3675) def
bond1 87
bond_direction 87 88
atom 89 (301) (72560, -47548, -1658) def
bond1 88
bond_direction 88 89
atom 90 (301) (68521, -46780, -6359) def
bond1 89
bond_direction 89 90
atom 91 (301) (62744, -47463, -8630) def
bond1 90
bond_direction 90 91
atom 92 (301) (56656, -48407, -7604) def
bond1 91
bond_direction 91 92
atom 93 (301) (51804, -48317, -3673) def
bond1 92
bond_direction 92 93
atom 94 (301) (49263, -46297, 1660) def
bond1 93
bond_direction 93 94
atom 95 (301) (48959, -37157, 6361) def
bond1 94
bond_direction 94 95
atom 96 (301) (50658, -31593, 8632) def
bond1 95
bond_direction 95 96
atom 97 (301) (49757, -22066, 7606) def
bond1 96
bond_direction 96 97
atom 98 (301) (46825, -15158, 3675) def
bond1 97
bond_direction 97 98
atom 99 (301) (45288, -12298, -1658) def
bond1 98
bond_direction 98 99
atom 100 (301) (41249, -11529, -6359) def
bond1 99
bond_direction 99 100
atom 101 (301) (35472, -12213, -8630) def
bond1 100
bond_direction 100 101
atom 102 (301) (29384, -13156, -7604) def
bond1 101
bond_direction 101 102
atom 103 (301) (24532, -13067, -3673) def
bond1 102
bond_direction 102 103
atom 104 (301) (21991, -11046, 1660) def
bond1 103
bond_direction 103 104
atom 105 (301) (21952, -6935, 6361) def
bond1 84 104
bond_direction 105 84
bond_direction 104 105
atom 106 (0) (70309, -63938, 9145) def
bond1 86
bond_direction 106 86
info chunk color = 0 0 153
egroup (DnaStrand2)
group (DnaSegment2) DnaSegment
info opengroup open = False
forward_ref (99507136) # DnaSegmentMarker (DnaMarker4)
mol (DnaAxisChunk4) def
atom 107 (300) (22559, 17012, 0) def
bond1 23
atom 108 (300) (24378, 19620, 0) def
bond1 24 107
atom 109 (300) (26198, 22228, 0) def
bond1 25 108
atom 110 (300) (28017, 24836, 0) def
bond1 26 109
atom 111 (300) (29836, 27445, 0) def
bond1 27 110
atom 112 (300) (30067, 38257, 0) def
bond1 28 111
atom 113 (300) (31887, 40865, 0) def
bond1 29 112
atom 114 (300) (33706, 43473, 0) def
bond1 30 113
atom 115 (300) (35525, 46081, 0) def
bond1 31 114
atom 116 (300) (37345, 48690, 0) def
bond1 32 115
atom 117 (300) (39164, 51298, 0) def
bond1 33 116
atom 118 (300) (48128, 53376, 0) def
bond1 34 117
atom 119 (300) (49947, 55984, 0) def
bond1 35 118
atom 120 (300) (51767, 58592, 0) def
bond1 36 119
atom 121 (300) (53586, 61201, 0) def
bond1 37 120
atom 122 (300) (55405, 63809, 0) def
bond1 38 121
atom 123 (300) (68603, 93410, 0) def
bond1 39 122
atom 124 (300) (70423, 96018, 0) def
bond1 40 123
atom 125 (300) (72242, 98626, 0) def
bond1 41 124
atom 126 (300) (74061, 101235, 0) def
bond1 42 125
atom 127 (0) (21649, 15708, 0) def
bond1 107
atom 128 (0) (74971, 102539, 0) def
bond1 126
info chunk color = 128 128 128
DnaSegmentMarker (DnaMarker4) (127, 127, 127) 107 108
info leaf forwarded = 99507136
egroup (DnaSegment2)
group (DnaStrand4) DnaStrand
info opengroup open = True
forward_ref (99715872) # DnaStrandMarker (DnaMarker6)
mol (DnaStrandChunk8) def
atom 129 (301) (27424, 13619, 6361) def
bond1 107
atom 130 (301) (31381, 14736, 1660) def
bond1 108 129
bond_direction 130 129
atom 131 (301) (32663, 17719, -3673) def
bond1 109 130
bond_direction 131 130
atom 132 (301) (31476, 22424, -7604) def
bond1 110 131
bond_direction 132 131
atom 133 (301) (28967, 28051, -8630) def
bond1 111 132
bond_direction 133 132
atom 134 (301) (25203, 41650, -6359) def
bond1 112 133
bond_direction 134 133
atom 135 (301) (24885, 45749, -1658) def
bond1 113 134
bond_direction 135 134
atom 136 (301) (27241, 47983, 3675) def
bond1 114 135
bond_direction 136 135
atom 137 (301) (32067, 48494, 7606) def
bond1 115 136
bond_direction 137 136
atom 138 (301) (38213, 48084, 8632) def
bond1 116 137
bond_direction 138 137
atom 139 (301) (45616, 39701, 6361) def
bond1 117 138
bond_direction 139 138
atom 140 (301) (49573, 40818, 1660) def
bond1 118 139
bond_direction 140 139
atom 141 (301) (56412, 51475, -3673) def
bond1 119 140
bond_direction 141 140
atom 142 (301) (55225, 56180, -7604) def
bond1 120 141
bond_direction 142 141
atom 143 (301) (52717, 61807, -8630) def
bond1 121 142
bond_direction 143 142
atom 144 (301) (61920, 94195, -6359) def
bond1 122 143
bond_direction 144 143
atom 145 (301) (61601, 98294, -1658) def
bond1 123 144
bond_direction 145 144
atom 146 (301) (63958, 100528, 3675) def
bond1 124 145
bond_direction 146 145
atom 147 (301) (68783, 101039, 7606) def
bond1 125 146
bond_direction 147 146
atom 148 (301) (74930, 100628, 8632) def
bond1 126 147
bond_direction 148 147
atom 149 (0) (78006, 100422, 9145) def
bond1 148
bond_direction 149 148
info chunk color = 0 255 0
DnaStrandMarker (DnaMarker6) (0, 255, 0) 129 130
info leaf forwarded = 99715872
mol (DnaStrandChunk12) def
atom 150 (301) (77526, -55831, -5110) def
atom 151 (301) (72150, -56180, -8269) def
bond1 150
bond_direction 151 150
atom 152 (301) (65986, -57186, -8269) def
bond1 151
bond_direction 152 151
atom 153 (301) (60610, -57535, -5110) def
bond1 152
bond_direction 153 152
atom 154 (301) (57297, -56160, 0) def
bond1 153
bond_direction 154 153
atom 155 (301) (56532, -52654, 5112) def
bond1 154
bond_direction 155 154
atom 156 (301) (57830, -47426, 8271) def
bond1 155
bond_direction 156 155
atom 157 (301) (59651, -36511, 8271) def
bond1 156
bond_direction 157 156
atom 158 (301) (60948, -31282, 5112) def
bond1 157
bond_direction 158 157
atom 159 (301) (60184, -27777, 0) def
bond1 158
bond_direction 159 158
atom 160 (301) (56870, -26402, -5110) def
bond1 159
bond_direction 160 159
atom 161 (301) (51494, -26751, -8269) def
bond1 160
bond_direction 161 160
atom 162 (301) (45331, -27757, -8269) def
bond1 161
bond_direction 162 161
atom 163 (301) (33339, -22284, -5110) def
bond1 162
bond_direction 163 162
atom 164 (301) (30025, -20909, 0) def
bond1 163
bond_direction 164 163
atom 165 (301) (29260, -17404, 5112) def
bond1 164
bond_direction 165 164
atom 166 (301) (30558, -12176, 8271) def
bond1 165
bond_direction 166 165
atom 167 (301) (32643, -6289, 8271) def
bond1 166
bond_direction 167 166
atom 168 (301) (31824, -795, 5112) def
bond1 167
bond_direction 168 167
atom 169 (301) (31059, 2708, 0) def
bond1 129 168
bond_direction 129 169
bond_direction 169 168
atom 170 (0) (80216, -55657, -3529) def
bond1 150
bond_direction 150 170
info chunk color = 0 255 0
egroup (DnaStrand4)
group (DnaSegment3) DnaSegment
info opengroup open = False
forward_ref (99748720) # DnaSegmentMarker (DnaMarker7)
mol (DnaAxisChunk6) def
atom 171 (300) (72127, -60343, 0) def
bond1 150 86
atom 172 (300) (70088, -57903, 0) def
bond1 151 87 171
atom 173 (300) (68048, -55463, 0) def
bond1 152 88 172
atom 174 (300) (66009, -53023, 0) def
bond1 153 89 173
atom 175 (300) (63970, -50583, 0) def
bond1 154 90 174
atom 176 (300) (61931, -48143, 0) def
bond1 155 91 175
atom 177 (300) (59628, -40675, 0) def
bond1 156 92 176
atom 178 (300) (57589, -38234, 0) def
bond1 157 93 177
atom 179 (300) (55549, -35794, 0) def
bond1 158 94 178
atom 180 (300) (53510, -33354, 0) def
bond1 159 95 179
atom 181 (300) (51471, -30914, 0) def
bond1 160 96 180
atom 182 (300) (49432, -28474, 0) def
bond1 161 97 181
atom 183 (300) (46599, -22594, 0) def
bond1 162 98 182
atom 184 (300) (38738, -17773, 0) def
bond1 163 99 183
atom 185 (300) (36698, -15333, 0) def
bond1 164 100 184
atom 186 (300) (34659, -12892, 0) def
bond1 165 101 185
atom 187 (300) (32620, -10452, 0) def
bond1 166 102 186
atom 188 (300) (30581, -8012, 0) def
bond1 167 103 187
atom 189 (300) (28542, -5572, 0) def
bond1 168 104 188
atom 190 (300) (24386, -2867, 0) def
bond1 169 105 189
atom 191 (0) (23366, -1647, 0) def
bond1 190
atom 192 (0) (73147, -61564, 0) def
bond1 171
info chunk color = 128 128 128
DnaSegmentMarker (DnaMarker7) (127, 127, 127) 190 189
info leaf forwarded = 99748720
egroup (DnaSegment3)
egroup (DnaGroup1)
egroup (60bp_PAM3_3way_junction)
end1
group (Clipboard)
info opengroup open = False
egroup (Clipboard)
end molecular machine part 60bp_PAM3_3way_junction