[Deep brain fluorescence imaging with minimally invasive ultra-thin optical fibers](https://arxiv.org/abs/1703.07633)

[Automated scalable segmentation of neurons from multispectral images](https://arxiv.org/abs/1611.00388)

[Probabilistic fluorescence-based synapse detection](https://arxiv.org/abs/1611.05479)

[Quantifying mesoscale neuroanatomy using X-ray microtomography](https://arxiv.org/abs/1604.03629)

[Morphological error detection in 3d segmentations](https://arxiv.org/abs/1705.10882)

[Opto-magnetic imaging of neural network activity in brain slices at high resolution using color centers in diamond](https://arxiv.org/abs/1708.06158)

[A deep structured learning approach towards automating connectome reconstruction from 3d electron micrographs](https://arxiv.org/abs/1709.02974)

[Comparative prospects of imaging methods for whole-brain mammalian connectomics](https://arxiv.org/abs/2405.10488v1)

[Predicting functional neuroanatomical maps from fusing brain networks with genetic information](http://biorxiv.org/content/early/2016/10/11/070037) (2016)

[Super-resolution imaging of synaptic and extra-synaptic pools of AMPA receptors with different-sized fluorescent probes](https://biorxiv.org/content/early/2016/12/27/096966) and <https://x.com/biorxiv_neursci/status/813942699879497729>

[Multiplexed confocal and super-resolution fluorescence imaging of cytoskeletal and neuronal synapse proteins](http://www.biorxiv.org/content/early/2017/02/25/111625) and <https://x.com/eboyden3/status/836175796117065728>

[Rapid whole brain imaging of neural activities in freely behaving larval zebrafish](http://biorxiv.org/content/early/2017/04/28/131532) (2017)

[Whole-brain serial-section electron microscopy in larval zebrafish](http://biorxiv.org/content/early/2017/05/07/134882) (2017)

[A complete electron microscopy volume of the brain of adult drosophila melanogaster](http://biorxiv.org/content/early/2017/05/22/140905) (2017)

[Oblique light-sheet tomography: fast and high resolution volumetric imaging of mouse brains](http://www.biorxiv.org/content/early/2017/07/05/132423) (2017)

[In vivo magnetic recording of neuronal activity](http://www.biorxiv.org/content/early/2017/06/26/092569) (2017)

[Scalable volumetric imaging for ultrahigh-speed brain mapping at synaptic resolution](https://www.biorxiv.org/content/early/2017/12/29/240770) (2017)

[Deep image reconstruction from human brain activity](https://www.biorxiv.org/content/biorxiv/early/2017/12/30/240317.full.pdf) (2017)

[Cortical column and whole brain imaging of neural circuits with molecular contrast and nanoscale resolution](https://www.biorxiv.org/content/early/2018/07/23/374140) (2018)

[Freeze-frame imaging of synaptic activity using SynTagMA](https://www.biorxiv.org/content/10.1101/538041v1)

[Population imaging of neural activity in awake behaving mice in multiple brain regions](https://www.biorxiv.org/content/10.1101/616094v1) and <https://x.com/eboyden3/status/1121778597205827584>

[A petascale automated imaging pipeline for mapping neuronal circuits with high-throughput transmission electron microscopy](https://www.biorxiv.org/content/10.1101/791889v1)

[Enabling FIB-SEM systems for large volume connectomics and cell biology](https://www.biorxiv.org/content/10.1101/852863v1)

[Automatic whole cell organelle segmentation in volumetric electron microscopy](https://www.biorxiv.org/content/10.1101/2020.11.14.382143v1)

russell hanson has a technique for gold nanoparticle aptamer conjugates for microCT x-ray imaging of the distribution of neurotransmitter receptors throughout human brain matter as a non-destructive imaging technique.

See also [[brain uploading]].